The procurement, storage, and quality assurance of frozen blood and tissue biospecimens in pathology, biorepository, and biobank settings.

TitleThe procurement, storage, and quality assurance of frozen blood and tissue biospecimens in pathology, biorepository, and biobank settings.
Publication TypeJournal Article
Year of Publication2014
AuthorsShabihkhani, M, Lucey, GM, Wei, B, Mareninov, S, Lou, JJ, Vinters, HV, Singer, EJ, Cloughesy, TF, Yong, WH
JournalClin Biochem
Volume47
Issue4-5
Pagination258-66
Date Published2014 Mar
ISSN1873-2933
KeywordsArtifacts, Biological Specimen Banks, Cryopreservation, Freezing, Guidelines as Topic, Humans, Internal, Protein Stability, Quality Control, RNA Stability, Specimen Handling, Time Factors
Abstract

Well preserved frozen biospecimens are ideal for evaluating the genome, transcriptome, and proteome. While papers reviewing individual aspects of frozen biospecimens are available, we present a current overview of experimental data regarding procurement, storage, and quality assurance that can inform the handling of frozen biospecimens. Frozen biospecimen degradation can be influenced by factors independent of the collection methodology including tissue type, premortem agonal changes, and warm ischemia time during surgery. Rapid stabilization of tissues by snap freezing immediately can mitigate artifactually altered gene expression and, less appreciated, protein phosphorylation profiles. Collection protocols may be adjusted for specific tissue types as cellular ischemia tolerance varies widely. If data is not available for a particular tissue type, a practical goal is snap freezing within 20min. Tolerance for freeze-thaw events is also tissue type dependent. Tissue storage at -80°C can preserve DNA and protein for years but RNA can show degradation at 5years. For -80°C freezers, aliquots frozen in RNAlater or similar RNA stabilizing solutions are a consideration. It remains unresolved as to whether storage at -150°C provides significant advantages relative to that at -80°C. Histologic quality assurance of tissue biospecimens is typically performed at the time of surgery but should also be conducted on the aliquot to be distributed because of tissue heterogeneity. Biobanking protocols for blood and its components are highly dependent on intended use and multiple collection tube types may be needed. Additional quality assurance testing should be dictated by the anticipated downstream applications.

DOI10.1016/j.clinbiochem.2014.01.002
Alternate JournalClin Biochem
PubMed ID24424103
PubMed Central IDPMC3982909
Grant ListP50 AG016570 / AG / NIA NIH HHS / United States
U01 MH083500 / MH / NIMH NIH HHS / United States
U24 MH100929 / MH / NIMH NIH HHS / United States
P50 AG016570-11A / AG / NIA NIH HHS / United States